Most Recent Additions

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Modeling nuclear blebs in a nucleoskeleton of independent filament networks.
Nicholas S. Wren, Zhixia Zhong, Russell S. Schwartz, and Kris N. Dahl

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Inference of tumor phylogenies from genomic assays on heterogeneous samples.
Ayshwarya Subramanian, Stanley E. Shackney, and Russell S. Schwartz

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A report of the Curriculum Task Force of the ISCB Education Committee.
Lonnie R Welch, Russell Schwartz, and Fran Lewitter

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LED Street Light Research Project
Stephen Quick and Donald K. Carter

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Innovation Oakland: Direction, Information, Destination
Donald K. Carter, Elise Gatti, and Christine Brill

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Single-Cell Genetic Analysis Reveals Insights into Clonal Development of Prostate Cancers and Indicates Loss of PTEN as a Marker of Poor Prognosis.
Kerstin M. Heselmeyer-Haddad, Lissa Y. Berroa Garcia, Amanda Bradley, Leanora Hernandez, Yue Hu, Jens K. Habermann, Christoph Dumke, Christoph Thorns, Sven Perner, Ekaterina Pestova, Catherine Burke, Salim A. Chowdhury, Russell S. Schwartz, Alejandro H. Schäffer, Pamela L. Paris, and Thomas Ried

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Identification of novel mutations by exome sequencing in African American colorectal cancer patients.
Hassan Ashktorab, Mohammad Daremipouran, Joe Devaney, Sudhir Varma, Hamed Rahi, Edward Lee, Babak Shokrani, Russell Schwartz, Michael L Nickerson, and Hassan Brim

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Phenotypic signatures arising from unbalanced bacterial growth.
Cheemeng Tan, Robert Phillip Smith, Ming-Chi Tsai, Russell S. Schwartz, and Lingchong You

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Algorithms to model single gene, single chromosome, and whole genome copy number changes jointly in tumor phylogenetics.
Salim A. Chowdhury, Stanley E. Shackney, Kerstin M. Heselmeyer-Haddad, Thomas Ried, Alejandro H. Schäffer, and Russell S. Schwartz

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Computational biology and bioinformatics.
Serafim Batzoglou and Russell S. Schwartz

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Reply to 'Complexity of molecular crowding in cell-free enzymatic reaction networks'.
Cheemeng Tan, Saumya Saurabh, Marcel P. Bruchez, Russell S. Schwartz, and Philip LeDuc

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Bioinformatics curriculum guidelines: toward a definition of core competencies.
Lonnie Welch, Fran Lewitter, Russell S. Schwartz, Cath Brooksbank, Predrag Radivojac, Bruno Gaeta, and Maria Victoria Schneider

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Applying molecular crowding models to simulations of virus capsid assembly in vitro.
Gregory R. Smith, Lu Xie, Byoungkoo Lee, and Russell S. Schwartz

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Novel multisample scheme for inferring phylogenetic markers from whole genome tumor profiles.
Ayshwarya Subramanian, Stanley E. Shackney, and Russell S. Schwartz

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Molecular crowding shapes gene expression in synthetic cellular nanosystems.
Cheemeng Tan, Saumya Saurabh, Marcel P. Bruchez, Russell S. Schwartz, and Philip LeDuc

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Phylogenetic analysis of multiprobe fluorescence in situ hybridization data from tumor cell populations.
Salim A. Chowdhury, Stanley E. Shackney, Kerstin M. Heselmeyer-Haddad, Thomas Ried, Alejandro H. Schäffer, and Russell S. Schwartz

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Single-cell genetic analysis of ductal carcinoma in situ and invasive breast cancer reveals enormous tumor heterogeneity yet conserved genomic imbalances and gain of MYC during progression.
Kerstin M. Heselmeyer-Haddad, Lissa Y. Berroa Garcia, Amanda Bradley, Clarymar Ortiz-Melendez, Woei-Jyh Lee, Rebecca Christensen, Sheila A. Prindiville, Kathleen A. Calzone, Peter W. Soballe, Salim A. Chowdhury, Russell S. Schwartz, Alejandro H. Schäffer, and Thomas Ried

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Surveying capsid assembly pathways through simulation-based data fitting.
Lu Xie, Gregory R. Smith, Xian Feng, and Russell S. Schwartz

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Biological colloid engineering: Self-assembly of dipolar ferromagnetic chains in a functionalized biogenic ferrofluid.
Warren C. Ruder, Chia-Pei D. Hsu, Brent D. Edelman, Russell S. Schwartz, and Philip LeDuc

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The microtubule plus-end tracking protein EB1 is required for Kv1 voltage-gated K+ channel axonal targeting.
Chen Gu, Wei Zhou, Manojkumar A. Puthenveedu, Mingxuan Xu, Yuh-Nung Jan, and Lily Y Jan

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Cargo regulates clathrin-coated pit dynamics.
Manojkumar A. Puthenveedu and Mark von Zastrow

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Distinct modes of regulated receptor insertion to the somatodendritic plasma membrane.
Guillermo A. Yudowski, Manojkumar A. Puthenveedu, and Mark von Zastrow

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Divide and conquer is always best: sensitivity of methyl correlation experiments.
Kaustubh Sinha, Linda Jen-Jacobson, and Gordon S. Rule

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A variable light domain fluorogen activating protein homodimerizes to activate dimethylindole red.
Nina Senutovich, Robyn L. Stanfield, Shantanu Bhattacharyya, Gordon S. Rule, Ian A. Wilson, Bruce A. Armitage, Alan S. Waggoner, and Peter B. Berget

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Sequence-specific interactions in the RNA-binding domain of Escherichia coli transcription termination factor Rho.
T. Kevin Hitchens, Yiping Zhan, Lislott V. Richardson, John P. Richardson, and Gordon S. Rule

*Updated as of 10/24/14.